- Academy of Theatre Arts
- Centre for African Studies
- Centre for Central Eurasian Studies
- Department of Applied Psychology
- Department of Arabic
- Department of Civics Politics
- Department of English
- Department of French
- Department of Geography
- Department of German
- Department of Gujarati
- Department of Hindi
- Department of History
- Department of Kannada
- Department of Linguistics
- Department of Lok kala Academy
- Department of Marathi
- Department of Pali
- Department of Persian
- Department of Philosophy
- Department of Russian Studies
- Department of Sanskrit
- Department of Sindhi
- Department of Sociology
- Department of Urdu
- Sir J. J. College of Architecture
- Centre for Basic Sciences
- Department of Bio-physics
- Department of Bio-technology
- Department of Chemistry
- Department of Computer Science
- Department of Information Technology
- Department of Library & Information Science
- Department of Mathematics
- Department of Physics
- Department of Statistics
- National Center for Nano-science and Nanotechnology
- Academy for Administrative Career
- Centre for Extra Mural Studies
- Chanakya Institute of Public Leadership
- Confucius Center
- Department of Communication Journalism
- Department of Physical Education
- Garware Institute of Career Education and Development
- Mahatma Gandhi Peace Center
- Rajiv Gandhi Center for Contemporary Studies
- Thane Sub-centre